Package gromacs :: Package analysis :: Package plugins :: Module cysaccessibility
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Module cysaccessibility

source code


CysAccessibility plugin
=======================

Cysteine accessibility is analyzed by histogramming the distance of
shortest approach of water molecules to the sulfhydryl group of Cys.

See class docs for more details.

.. note::

   This plugin is the canonical example for how to structure plugins that
   conform to the plugin API (see docs :mod:`gromacs.analysis.core` for
   details).

Plugin class
------------

.. autoclass:: CysAccessibility
   :members: worker_class
   :undoc-members:

Worker class
------------

The worker class performs the analysis.

.. autoclass:: _CysAccessibility
   :members:

Classes [hide private]
  _CysAccessibility
Analysis of Cysteine accessibility.
  CysAccessibility
*CysAccessibility* plugin.