A C D E F G H I J L M P R S T U W

D

distance(Atom) - Method in class jgromacs.data.Atom

Returns the Euclidean distance between this atom and another atom

distance(Point3D) - Method in class jgromacs.data.Point3D

Returns the Euclidean distance between this point and another point

distanceAlphaCarbons(Residue) - Method in class jgromacs.data.Residue

Returns the Euclidean distance of alpha-carbon atoms of this amino acid an another

distanceClosest(Residue) - Method in class jgromacs.data.Residue

Returns the Euclidean distance of the closest atoms of this amino acid and another

distanceClosestHeavy(Residue) - Method in class jgromacs.data.Residue

Returns the Euclidean distance of the closest heavy atoms of this amino acid and another

Distances - Class in jgromacs.analysis

Collection of methods for analysing distances

Distances() - Constructor for class jgromacs.analysis.Distances

Dynamics - Class in jgromacs.analysis

Collection of methods for analysing molecular motions

Dynamics() - Constructor for class jgromacs.analysis.Dynamics