edPDB — Simple processing of PDB files

The edPDB module contains extensions to the Biopython Bio.PDB module that help with editing PDB files in preparation for molecular dynamics simulations.

This module is completely independent from gromacs and distributed with GromacsWrapper as a convenience. As all other code, it is in a steady state of development and flux...

The edPDB module is distributed under the Biopython licence .

Contents:

See also

Bio.PDB in Biopython
edPDB is built on top of the great work done in the Bio.PDB module
pdbcat
Andrew Dahlke’s pdbcat tools might also be a useful alternative if you prefer shell to python.

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