Uses of Package
jgromacs.data

Packages that use jgromacs.data
jgromacs.analysis jgromacs.analysis is a collection of classes providing static methods for various analysis tasks 
jgromacs.data jgromacs.data is a collection of classes representing multiple levels of structural data 
jgromacs.io jgromacs.io provides parsers for reading and methods for writing GROMACS files 
 

Classes in jgromacs.data used by jgromacs.analysis
Angle
          Objects of this class represent an angle
Atom
          Objects of this class represent a single atom
FrameIndexSet
          Objects of this class represent a single frame index set
IndexSet
          Objects of this class represent a single index set
Point3D
          Objects of this class represent a single 3D point
PointList
          Objects of this class represent a list of 3D points
Structure
          Objects of this class represent a single structure
Trajectory
          Objects of this class represent a single trajectory
 

Classes in jgromacs.data used by jgromacs.data
Alignment
          Objects of this class represent a sequence alignment
Atom
          Objects of this class represent a single atom
FrameIndexSet
          Objects of this class represent a single frame index set
IndexSet
          Objects of this class represent a single index set
IndexSetList
          Objects of this class represent a list of index sets
Point3D
          Objects of this class represent a single 3D point
PointList
          Objects of this class represent a list of 3D points
Residue
          Objects of this class represent a single residue
Sequence
          Objects of this class represent a single amino acid sequence
SequencePosition
          Objects of this class represent a single sequence position
Structure
          Objects of this class represent a single structure
Trajectory
          Objects of this class represent a single trajectory
 

Classes in jgromacs.data used by jgromacs.io
Alignment
          Objects of this class represent a sequence alignment
IndexSet
          Objects of this class represent a single index set
IndexSetList
          Objects of this class represent a list of index sets
Sequence
          Objects of this class represent a single amino acid sequence
Structure
          Objects of this class represent a single structure
Trajectory
          Objects of this class represent a single trajectory