Table of Simulations for 1EK9


Length Environment Final Snapshot RMSD/RMSF Bilayer Distortion Contacts Notes
200 ns DPPC self assembly 300 K
200 ns DPPC self assembly
200 ns POPC self-assembly at 300 K
200 ns + 200 ns POPE, POPG 80:20 self assembly Curated at 200 ns 5 lipids removed
200 ns + 200 ns POPC self assembly Curated at 200 ns, 6 lipids removed
200 ns + 200 ns DLPC self assembly Curated at 200 ns 8 lipids removed
200ns DPPC self assembly
300 ns PLPC self assembly

Structural Bioinformatics & Computational Biochemistry, University of Oxford.